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Practical probabilistic inference

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dc.contributor Whitman Richards.
dc.contributor Massachusetts Institute of Technology. Dept. of Brain and Cognitive Sciences.
dc.contributor Massachusetts Institute of Technology. Dept. of Brain and Cognitive Sciences.
dc.creator Morris, Quaid Donald Jozef, 1972-
dc.date 2006-03-24T18:09:34Z
dc.date 2006-03-24T18:09:34Z
dc.date 2003
dc.date 2003
dc.identifier http://hdl.handle.net/1721.1/29989
dc.identifier 54792349
dc.description Thesis (Ph. D. in Computational Neuroscience)--Massachusetts Institute of Technology, Dept. of Brain and Cognitive Sciences, 2003.
dc.description Includes bibliographical references (leaves 157-163).
dc.description The design and use of expert systems for medical diagnosis remains an attractive goal. One such system, the Quick Medical Reference, Decision Theoretic (QMR-DT), is based on a Bayesian network. This very large-scale network models the appearance and manifestation of disease and has approximately 600 unobservable nodes and 4000 observable nodes that represent, respectively, the presence and measurable manifestation of disease in a patient. Exact inference of posterior distributions over the disease nodes is extremely intractable using generic algorithms. Inference can be made much more efficient by exploiting the QMR-DT's unique structure. Indeed, tailor-made inference algorithms for the QMR-DT efficiently generate exact disease posterior marginals for some diagnostic problems and accurate approximate posteriors for others. In this thesis, I identify a risk with using the QMR-DT disease posteriors for medical diagnosis. Specifically, I show that patients and physicians conspire to preferentially report findings that suggest the presence of disease. Because the QMR-DT does not contain an explicit model of this reporting bias, its disease posteriors may not be useful for diagnosis. Correcting these posteriors requires augmenting the QMR-DT with additional variables and dependencies that model the diagnostic procedure. I introduce the diagnostic QMR-DT (dQMR-DT), a Bayesian network containing both the QMR-DT and a simple model of the diagnostic procedure. Using diagnostic problems sampled from the dQMR-DT, I show the danger of doing diagnosis using disease posteriors from the unaugmented QMR-DT.
dc.description (cont.) I introduce a new class of approximate inference methods, based on feed-forward neural networks, for both the QMR-DT and the dQMR-DT. I show that these methods, recognition models, generate accurate approximate posteriors on the QMR-DT, on the dQMR-DT, and on a version of the dQMR-DT specified only indirectly through a set of presolved diagnostic problems.
dc.description by Quaid Donald Jozef Morris.
dc.description Ph.D.in Computational Neuroscience
dc.format 163 leaves
dc.format 5612326 bytes
dc.format 5612132 bytes
dc.format application/pdf
dc.format application/pdf
dc.format application/pdf
dc.language eng
dc.publisher Massachusetts Institute of Technology
dc.rights M.I.T. theses are protected by copyright. They may be viewed from this source for any purpose, but reproduction or distribution in any format is prohibited without written permission. See provided URL for inquiries about permission.
dc.rights http://dspace.mit.edu/handle/1721.1/7582
dc.subject Brain and Cognitive Sciences.
dc.title Practical probabilistic inference
dc.type Thesis


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